WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G8AL.1d.1 Sequence Name  Y48G8AL.1d.1
Length (nt)  1515   Chromosome Location  I: 1236322-1254499
Chromosome . Primary Identifier  I Chromosome Location . Start  1236322
Chromosome Location . End  1254499 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AL.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021685 herc-1 Y48G8AL.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G8AL.1d Y48G8AL.1d 1515   I: 1236322-1236358

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G8AL.1d.1 1236322 1254499 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2308   37   I: 1236322-1236358 Caenorhabditis elegans
Exon2313   152   I: 1237954-1238105 Caenorhabditis elegans
Exon2318   201   I: 1239439-1239639 Caenorhabditis elegans
Exon2323   156   I: 1241100-1241255 Caenorhabditis elegans
Exon2328   89   I: 1242769-1242857 Caenorhabditis elegans
Exon2333   166   I: 1245227-1245392 Caenorhabditis elegans
Exon2338   228   I: 1247363-1247590 Caenorhabditis elegans
Exon2344   180   I: 1247779-1247958 Caenorhabditis elegans
Exon2351   183   I: 1253333-1253515 Caenorhabditis elegans
Exon2355   123   I: 1254377-1254499 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G8AL.1d.1 1236322 1254499 1

1 Sequence

Length
1515

1 Sequence Ontology Term

Identifier Name Description
transcript