WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G8AL.1a.1 Sequence Name  Y48G8AL.1a.1
Length (nt)  3290   Chromosome Location  I: 1211485-1254719
Chromosome . Primary Identifier  I Chromosome Location . Start  1211485
Chromosome Location . End  1254719 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AL.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021685 herc-1 Y48G8AL.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G8AL.1a Y48G8AL.1a 3060   I: 1211495-1211588

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48G8AL.1a.1 1211485 1254719 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2259   104   I: 1211485-1211588 Caenorhabditis elegans
Exon2261   200   I: 1212574-1212773 Caenorhabditis elegans
Exon2263   193   I: 1213787-1213979 Caenorhabditis elegans
Exon2271   198   I: 1221047-1221244 Caenorhabditis elegans
Exon2273   151   I: 1222677-1222827 Caenorhabditis elegans
Exon2293   262   I: 1232373-1232634 Caenorhabditis elegans
Exon2296   107   I: 1233777-1233883 Caenorhabditis elegans
Exon2300   181   I: 1234493-1234673 Caenorhabditis elegans
Exon2304   196   I: 1236163-1236358 Caenorhabditis elegans
Exon2309   152   I: 1237954-1238105 Caenorhabditis elegans
Exon2314   201   I: 1239439-1239639 Caenorhabditis elegans
Exon2319   156   I: 1241100-1241255 Caenorhabditis elegans
Exon2324   89   I: 1242769-1242857 Caenorhabditis elegans
Exon2329   166   I: 1245227-1245392 Caenorhabditis elegans
Exon2334   228   I: 1247363-1247590 Caenorhabditis elegans
Exon2340   180   I: 1247779-1247958 Caenorhabditis elegans
Exon2347   183   I: 1253333-1253515 Caenorhabditis elegans
Exon2357   343   I: 1254377-1254719 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48G8AL.1a.1 1211485 1254719 1

1 Sequence

Length
3290

1 Sequence Ontology Term

Identifier Name Description
transcript