WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G8AL.6.1 Sequence Name  Y48G8AL.6.1
Length (nt)  4675   Chromosome Location  I: 1176473-1190829
Chromosome . Primary Identifier  I Chromosome Location . Start  1176473
Chromosome Location . End  1190829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AL.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004880 smg-2 Y48G8AL.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G8AL.6 Y48G8AL.6 3210   I: 1176475-1176621

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G8AL.6.1 1176473 1190829 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2230   149   I: 1176473-1176621 Caenorhabditis elegans
Exon2231   542   I: 1177878-1178419 Caenorhabditis elegans
Exon2232   389   I: 1179003-1179391 Caenorhabditis elegans
Exon2233   941   I: 1180247-1181187 Caenorhabditis elegans
Exon2234   85   I: 1182419-1182503 Caenorhabditis elegans
Exon2235   308   I: 1182872-1183179 Caenorhabditis elegans
Exon2236   285   I: 1184851-1185135 Caenorhabditis elegans
Exon2237   214   I: 1187290-1187503 Caenorhabditis elegans
Exon2238   1762   I: 1189068-1190829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G8AL.6.1 1176473 1190829 1

1 Sequence

Length
4675

1 Sequence Ontology Term

Identifier Name Description
transcript