WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G8AL.11a.1 Sequence Name  Y48G8AL.11a.1
Length (nt)  2136   Chromosome Location  I: 1162880-1175809
Chromosome . Primary Identifier  I Chromosome Location . Start  1162880
Chromosome Location . End  1175809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G8AL.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001816 haf-6 Y48G8AL.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G8AL.11a Y48G8AL.11a 2007   I: 1162953-1163042

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G8AL.11a.1 1162880 1175809 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon2209   163   I: 1162880-1163042 Caenorhabditis elegans
Exon2213   218   I: 1164509-1164726 Caenorhabditis elegans
Exon2215   100   I: 1166226-1166325 Caenorhabditis elegans
Exon2217   206   I: 1166378-1166583 Caenorhabditis elegans
Exon2220   325   I: 1167652-1167976 Caenorhabditis elegans
Exon2222   244   I: 1169557-1169800 Caenorhabditis elegans
Exon2224   227   I: 1170670-1170896 Caenorhabditis elegans
Exon2227   288   I: 1173808-1174095 Caenorhabditis elegans
Exon2228   244   I: 1175384-1175627 Caenorhabditis elegans
Exon2229   121   I: 1175689-1175809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G8AL.11a.1 1162880 1175809 -1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
transcript