WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:F54A5.3f Sequence Name  F54A5.3f
Length (nt)  947   Chromosome Location  I: 969680-976550
Chromosome . Primary Identifier  I Chromosome Location . Start  969680
Chromosome Location . End  976550 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54A5.3f

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018788 shc-1 F54A5.3 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54A5.3f 969680 976550 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1918   159   I: 969680-969838 Caenorhabditis elegans
Exon1927   91   I: 969893-969983 Caenorhabditis elegans
Exon1936   627   I: 971460-972086 Caenorhabditis elegans
Exon1957   70   I: 976481-976550 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54A5.3f 969680 976550 -1

1 Sequence

Length
947

1 Sequence Ontology Term

Identifier Name Description
transcript