WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54A5.3b.1 Sequence Name  F54A5.3b.1
Length (nt)  5250   Chromosome Location  I: 969088-976560
Chromosome . Primary Identifier  I Chromosome Location . Start  969088
Chromosome Location . End  976560 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54A5.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018788 shc-1 F54A5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54A5.3b F54A5.3b 684   I: 969680-969838

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54A5.3b.1 969088 976560 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1911   751   I: 969088-969838 Caenorhabditis elegans
Exon1921   91   I: 969893-969983 Caenorhabditis elegans
Exon1933   544   I: 971460-972003 Caenorhabditis elegans
Exon1943   290   I: 972648-972937 Caenorhabditis elegans
Exon1955   3574   I: 972987-976560 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54A5.3b.1 969088 976560 -1

1 Sequence

Length
5250

1 Sequence Ontology Term

Identifier Name Description
transcript