WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54A5.2a.1 Sequence Name  F54A5.2a.1
Length (nt)  1228   Chromosome Location  I: 963693-969457
Chromosome . Primary Identifier  I Chromosome Location . Start  963693
Chromosome Location . End  969457 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54A5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018787 cutl-20 F54A5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54A5.2a F54A5.2a 1083   I: 963713-964052

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F54A5.2a.1 963693 969457 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1885   360   I: 963693-964052 Caenorhabditis elegans
Exon1888   83   I: 964114-964196 Caenorhabditis elegans
Exon1892   123   I: 966476-966598 Caenorhabditis elegans
Exon1896   87   I: 966647-966733 Caenorhabditis elegans
Exon1900   145   I: 966779-966923 Caenorhabditis elegans
Exon1904   83   I: 968235-968317 Caenorhabditis elegans
Exon1907   126   I: 968363-968488 Caenorhabditis elegans
Exon1914   221   I: 969237-969457 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F54A5.2a.1 963693 969457 -1

1 Sequence

Length
1228

1 Sequence Ontology Term

Identifier Name Description
transcript