WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y18H1A.3e.1 Sequence Name  Y18H1A.3e.1
Length (nt)  3946   Chromosome Location  I: 700634-715875
Chromosome . Primary Identifier  I Chromosome Location . Start  700634
Chromosome Location . End  715875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y18H1A.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021209 hgap-1 Y18H1A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y18H1A.3e Y18H1A.3e 3921   I: 700634-700786

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y18H1A.3e.1 700634 715875 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1382   153   I: 700634-700786 Caenorhabditis elegans
Exon1387   108   I: 701756-701863 Caenorhabditis elegans
Exon1392   1737   I: 702249-703985 Caenorhabditis elegans
Exon1396   132   I: 704419-704550 Caenorhabditis elegans
Exon1400   246   I: 706419-706664 Caenorhabditis elegans
Exon1403   325   I: 707946-708270 Caenorhabditis elegans
Exon1406   227   I: 710039-710265 Caenorhabditis elegans
Exon1408   265   I: 711731-711995 Caenorhabditis elegans
Exon1410   433   I: 713216-713648 Caenorhabditis elegans
Exon1412   169   I: 715474-715642 Caenorhabditis elegans
Exon1414   151   I: 715725-715875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y18H1A.3e.1 700634 715875 -1

1 Sequence

Length
3946

1 Sequence Ontology Term

Identifier Name Description
transcript