WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y65B4BR.2a.1 Sequence Name  Y65B4BR.2a.1
Length (nt)  1025   Chromosome Location  I: 557375-561671
Chromosome . Primary Identifier  I Chromosome Location . Start  557375
Chromosome Location . End  561671 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65B4BR.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002393 lpr-1 Y65B4BR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y65B4BR.2a Y65B4BR.2a 786   I: 557506-557572

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y65B4BR.2a.1 557375 561671 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1085   198   I: 557375-557572 Caenorhabditis elegans
Exon1088   140   I: 558404-558543 Caenorhabditis elegans
Exon1094   157   I: 559507-559663 Caenorhabditis elegans
Exon1100   162   I: 559706-559867 Caenorhabditis elegans
Exon1103   97   I: 560702-560798 Caenorhabditis elegans
Exon1112   271   I: 561401-561671 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y65B4BR.2a.1 557375 561671 1

1 Sequence

Length
1025

1 Sequence Ontology Term

Identifier Name Description
transcript