WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y65B4BR.4a.1 Sequence Name  Y65B4BR.4a.1
Length (nt)  2968   Chromosome Location  I: 537122-542198
Chromosome . Primary Identifier  I Chromosome Location . Start  537122
Chromosome Location . End  542198 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y65B4BR.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007009 wwp-1 Y65B4BR.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y65B4BR.4a Y65B4BR.4a 2385   I: 537138-537243

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y65B4BR.4a.1 537122 542198 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon1041   122   I: 537122-537243 Caenorhabditis elegans
Exon1043   258   I: 537303-537560 Caenorhabditis elegans
Exon1045   230   I: 537606-537835 Caenorhabditis elegans
Exon1047   210   I: 538702-538911 Caenorhabditis elegans
Exon1050   275   I: 539453-539727 Caenorhabditis elegans
Exon1054   214   I: 539795-540008 Caenorhabditis elegans
Exon1058   321   I: 540064-540384 Caenorhabditis elegans
Exon1062   261   I: 540723-540983 Caenorhabditis elegans
Exon1066   222   I: 541064-541285 Caenorhabditis elegans
Exon1072   855   I: 541344-542198 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y65B4BR.4a.1 537122 542198 1

1 Sequence

Length
2968

1 Sequence Ontology Term

Identifier Name Description
transcript