WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50C1A.1b.1 Sequence Name  Y50C1A.1b.1
Length (nt)  1901   Chromosome Location  I: 402291-412907
Chromosome . Primary Identifier  I Chromosome Location . Start  402291
Chromosome Location . End  412907 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50C1A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021733 otub-2 Y50C1A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50C1A.1b Y50C1A.1b 1500   I: 402295-402417

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y50C1A.1b.1 402291 412907 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon838   127   I: 402291-402417 Caenorhabditis elegans
Exon841   204   I: 403514-403717 Caenorhabditis elegans
Exon843   169   I: 406063-406231 Caenorhabditis elegans
Exon845   175   I: 407370-407544 Caenorhabditis elegans
Exon847   243   I: 408521-408763 Caenorhabditis elegans
Exon849   283   I: 410344-410626 Caenorhabditis elegans
Exon851   233   I: 411203-411435 Caenorhabditis elegans
Exon852   467   I: 412441-412907 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y50C1A.1b.1 402291 412907 1

1 Sequence

Length
1901

1 Sequence Ontology Term

Identifier Name Description
transcript