WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50C1A.1a.1 Sequence Name  Y50C1A.1a.1
Length (nt)  2396   Chromosome Location  I: 398891-412919
Chromosome . Primary Identifier  I Chromosome Location . Start  398891
Chromosome Location . End  412919 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50C1A.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021733 otub-2 Y50C1A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50C1A.1a Y50C1A.1a 1929   I: 398949-399048

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50C1A.1a.1 398891 412919 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon834   158   I: 398891-399048 Caenorhabditis elegans
Exon835   81   I: 399189-399269 Caenorhabditis elegans
Exon836   153   I: 399953-400105 Caenorhabditis elegans
Exon837   93   I: 401955-402047 Caenorhabditis elegans
Exon839   125   I: 402293-402417 Caenorhabditis elegans
Exon840   204   I: 403514-403717 Caenorhabditis elegans
Exon842   169   I: 406063-406231 Caenorhabditis elegans
Exon844   175   I: 407370-407544 Caenorhabditis elegans
Exon846   243   I: 408521-408763 Caenorhabditis elegans
Exon848   283   I: 410344-410626 Caenorhabditis elegans
Exon850   233   I: 411203-411435 Caenorhabditis elegans
Exon853   479   I: 412441-412919 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50C1A.1a.1 398891 412919 1

1 Sequence

Length
2396

1 Sequence Ontology Term

Identifier Name Description
transcript