WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1BR.1.1 Sequence Name  Y48G1BR.1.1
Length (nt)  2088   Chromosome Location  I: 254267-259157
Chromosome . Primary Identifier  I Chromosome Location . Start  254267
Chromosome Location . End  259157 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1BR.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021675 Y48G1BR.1 Y48G1BR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1BR.1 Y48G1BR.1 1644   I: 254709-254802

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1BR.1.1 254267 259157 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon599   536   I: 254267-254802 Caenorhabditis elegans
Exon600   104   I: 254976-255079 Caenorhabditis elegans
Exon601   131   I: 255195-255325 Caenorhabditis elegans
Exon602   77   I: 255370-255446 Caenorhabditis elegans
Exon603   143   I: 255818-255960 Caenorhabditis elegans
Exon604   328   I: 256316-256643 Caenorhabditis elegans
Exon605   244   I: 257418-257661 Caenorhabditis elegans
Exon606   338   I: 258021-258358 Caenorhabditis elegans
Exon607   136   I: 258548-258683 Caenorhabditis elegans
Exon608   51   I: 259107-259157 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1BR.1.1 254267 259157 -1

1 Sequence

Length
2088

1 Sequence Ontology Term

Identifier Name Description
transcript