WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1BL.2a.1 Sequence Name  Y48G1BL.2a.1
Length (nt)  7665   Chromosome Location  I: 183364-208468
Chromosome . Primary Identifier  I Chromosome Location . Start  183364
Chromosome Location . End  208468 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1BL.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000227 atm-1 Y48G1BL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1BL.2a Y48G1BL.2a 7137   I: 183376-183456

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1BL.2a.1 183364 208468 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon478   93   I: 183364-183456 Caenorhabditis elegans
Exon479   123   I: 183507-183629 Caenorhabditis elegans
Exon480   485   I: 183725-184209 Caenorhabditis elegans
Exon487   163   I: 189049-189211 Caenorhabditis elegans
Exon488   319   I: 189645-189963 Caenorhabditis elegans
Exon489   511   I: 190557-191067 Caenorhabditis elegans
Exon490   122   I: 191178-191299 Caenorhabditis elegans
Exon491   144   I: 191582-191725 Caenorhabditis elegans
Exon492   80   I: 191779-191858 Caenorhabditis elegans
Exon493   404   I: 192692-193095 Caenorhabditis elegans
Exon495   346   I: 193589-193934 Caenorhabditis elegans
Exon497   89   I: 194710-194798 Caenorhabditis elegans
Exon499   196   I: 195020-195215 Caenorhabditis elegans
Exon501   167   I: 195357-195523 Caenorhabditis elegans
Exon503   251   I: 196083-196333 Caenorhabditis elegans
Exon505   449   I: 197205-197653 Caenorhabditis elegans
Exon507   115   I: 197959-198073 Caenorhabditis elegans
Exon509   457   I: 200047-200503 Caenorhabditis elegans
Exon511   391   I: 201303-201693 Caenorhabditis elegans
Exon513   324   I: 202124-202447 Caenorhabditis elegans
Exon515   292   I: 203067-203358 Caenorhabditis elegans
Exon517   424   I: 204262-204685 Caenorhabditis elegans
Exon519   145   I: 205074-205218 Caenorhabditis elegans
Exon521   298   I: 205300-205597 Caenorhabditis elegans
Exon523   172   I: 206420-206591 Caenorhabditis elegans
Exon525   89   I: 206693-206781 Caenorhabditis elegans
Exon527   251   I: 207061-207311 Caenorhabditis elegans
Exon530   765   I: 207704-208468 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1BL.2a.1 183364 208468 1

1 Sequence

Length
7665

1 Sequence Ontology Term

Identifier Name Description
transcript