WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1C.2a.1 Sequence Name  Y48G1C.2a.1
Length (nt)  2424   Chromosome Location  I: 72511-81066
Chromosome . Primary Identifier  I Chromosome Location . Start  72511
Chromosome Location . End  81066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1C.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000812 csk-1 Y48G1C.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1C.2a Y48G1C.2a 1620   I: 72649-72897

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1C.2a.1 72511 81066 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon118   80   I: 72511-72590 Caenorhabditis elegans
Exon119   251   I: 72647-72897 Caenorhabditis elegans
Exon123   77   I: 72941-73017 Caenorhabditis elegans
Exon127   162   I: 73605-73766 Caenorhabditis elegans
Exon131   184   I: 74625-74808 Caenorhabditis elegans
Exon135   320   I: 75171-75490 Caenorhabditis elegans
Exon139   162   I: 75951-76112 Caenorhabditis elegans
Exon143   205   I: 76949-77153 Caenorhabditis elegans
Exon147   87   I: 77713-77799 Caenorhabditis elegans
Exon151   135   I: 79313-79447 Caenorhabditis elegans
Exon159   761   I: 80306-81066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1C.2a.1 72511 81066 1

1 Sequence

Length
2424

1 Sequence Ontology Term

Identifier Name Description
transcript