WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1C.5.1 Sequence Name  Y48G1C.5.1
Length (nt)  3575   Chromosome Location  I: 55293-64066
Chromosome . Primary Identifier  I Chromosome Location . Start  55293
Chromosome Location . End  64066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1C.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021678 Y48G1C.5 Y48G1C.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1C.5 Y48G1C.5 3486   I: 55337-55450

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1C.5.1 55293 64066 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon97   158   I: 55293-55450 Caenorhabditis elegans
Exon99   158   I: 55890-56047 Caenorhabditis elegans
Exon100   170   I: 56124-56293 Caenorhabditis elegans
Exon101   151   I: 56537-56687 Caenorhabditis elegans
Exon102   182   I: 56872-57053 Caenorhabditis elegans
Exon103   369   I: 57257-57625 Caenorhabditis elegans
Exon105   1192   I: 59045-60236 Caenorhabditis elegans
Exon106   816   I: 61236-62051 Caenorhabditis elegans
Exon107   201   I: 62774-62974 Caenorhabditis elegans
Exon108   60   I: 63797-63856 Caenorhabditis elegans
Exon109   69   I: 63904-63972 Caenorhabditis elegans
Exon110   49   I: 64018-64066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1C.5.1 55293 64066 -1

1 Sequence

Length
3575

1 Sequence Ontology Term

Identifier Name Description
transcript