WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1C.4b.1 Sequence Name  Y48G1C.4b.1
Length (nt)  942   Chromosome Location  I: 52370-54360
Chromosome . Primary Identifier  I Chromosome Location . Start  52370
Chromosome Location . End  54360 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1C.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021677 pgs-1 Y48G1C.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1C.4b Y48G1C.4b 942   I: 52370-52410

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1C.4b.1 52370 54360 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon88   41   I: 52370-52410 Caenorhabditis elegans
Exon90   107   I: 52466-52572 Caenorhabditis elegans
Exon92   72   I: 53266-53337 Caenorhabditis elegans
Exon94   305   I: 53391-53695 Caenorhabditis elegans
Exon95   417   I: 53944-54360 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1C.4b.1 52370 54360 1

1 Sequence

Length
942

1 Sequence Ontology Term

Identifier Name Description
transcript