WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48G1C.4a.1 Sequence Name  Y48G1C.4a.1
Length (nt)  1407   Chromosome Location  I: 49921-54426
Chromosome . Primary Identifier  I Chromosome Location . Start  49921
Chromosome Location . End  54426 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48G1C.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021677 pgs-1 Y48G1C.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48G1C.4a Y48G1C.4a 1341   I: 49921-50016

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1C.4a.1 49921 54426 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon85   96   I: 49921-50016 Caenorhabditis elegans
Exon86   216   I: 50815-51030 Caenorhabditis elegans
Exon87   128   I: 52283-52410 Caenorhabditis elegans
Exon89   107   I: 52466-52572 Caenorhabditis elegans
Exon91   72   I: 53266-53337 Caenorhabditis elegans
Exon93   305   I: 53391-53695 Caenorhabditis elegans
Exon96   483   I: 53944-54426 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y48G1C.4a.1 49921 54426 1

1 Sequence

Length
1407

1 Sequence Ontology Term

Identifier Name Description
transcript