Genomics
1 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:M163.22.1 | M163.22.1 |
276
 |
X: 14465893-14466374 |
Other
1 CDSs
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| CDS:M163.22 | M163.22 |
276
|
X: 14465893-14466018 |
23 Allele
| Public Name |
|---|
| gk964260 |
| gk964029 |
| gk962707 |
| gk964028 |
| gk963810 |
| gk963581 |
| gk963779 |
| gk963780 |
| tm10331 |
| WBVar02124515 |
| WBVar02124658 |
| WBVar02122740 |
| gk963434 |
| gk301040 |
| gk301042 |
| gk301041 |
| WBVar01544962 |
| WBVar00085247 |
| WBVar00085248 |
| WBVar01552909 |
| gk861901 |
| gk490331 |
| gk566693 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00304195 | 14465893 | 14466374 | 1 |
3 Data Sets
| Name | URL |
|---|---|
| WormBaseAcedbConverter | |
| GO Annotation data set | |
| C. elegans genomic annotations (GFF3 Gene) |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_14466375..14466831 | 457 | X: 14466375-14466831 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| Genes expressed in N2. | Expressed transcripts were identified on the basis of a Present call in 3 out of 4 N2 experiments as determined by Affymetrix MAS 5.0. | WBPaper00025141:N2_Expressed_Genes | |
| heat-shock hlh-1 | Genes enriched in HLH-1 heat shock dataset. | A two-class unpaired analysis was performed to identify genes that are elevated 1.7-fold or greater when compared with the reference for each dataset, at a false discovery rate of 1.8% or less for M0 and 1.2% or less for the M24 datasets. | WBPaper00031003:hlh_1_enriched |
| Bacteria infection: Pseudomonas aeruginosa PA14 | Genes downregulated in worms grown on wild-type P. aeruginosa PA14 as compared to worms grown on an isogenic PA14 mutant gacA for 8 hours by at least 2 fold and P < 0.01, as determined by a t-test. | At least 2 fold and P < 0.01, as determined by a t-test. | WBPaper00028789:PA14_vs_gacA_downregulated_8hr |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrX_14465704..14465892 | 189 | X: 14465704-14465892 | Caenorhabditis elegans |
