WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00303376 Gene Name  CBG31419
Sequence Name  ? CBG31419 Organism  Caenorhabditis briggsae
Automated Description  Predicted to enable calcium ion binding activity. Predicted to be involved in homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in membrane. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CBG31419.1 CBG31419.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG31419 CBG31419   [unknown]

0 RNAi Result

31 Allele

Public Name
WBVar00000833
WBVar00000832
WBVar00000831
WBVar00112930
WBVar00112934
WBVar00112933
WBVar00112932
WBVar00112931
WBVar00112938
WBVar00112937
WBVar00112936
WBVar00112935
WBVar00112939
WBVar00112929
WBVar00112928
WBVar00112941
WBVar00112940
WBVar00112945
WBVar00112944
WBVar00112943
WBVar00112942
WBVar00112948
WBVar00112947
WBVar00112946
WBVar00027854
WBVar00027859
WBVar00027864
WBVar00027869
WBVar00027874
WBVar00027879

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in day 3 adults of C.briggsae AF16 comparing to in day 1 adults of AF16. DESeq2, p < 0.01, fold change > 2. WBPaper00068053:CBG_Day3_vs_Day1_upregulated

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  located_in
  involved_in
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  located_in
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region