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Transcripts that showed significantly increased expression in hda-2(ok1479) comparing to in N2 animals. |
DESeq2 (version 1.28.1), FDR < 0.01, fold change > 2. |
WBPaper00062159:hda-2(ok1479)_upregulated
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Transcripts that showed significantly decreased expression in npp-14(ax4543) comparing to in N2. |
DESeq2. Statistically significant genes were chosen based on a BenjaminiHochberg adjusted P-value of 0.05. |
WBPaper00067885:npp-14(ax4543)_downregulated
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Transcripts that showed significantly increased expression in nhr-8(hd117) comparing to in N2. |
Differentially expressed genes were identified using Sleuth (version 0.30.0). |
WBPaper00062446:nhr-8(hd117)_upregulated
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Transcripts that showed significantly increased expression in rotr-1(ums53) comparing to in N2 animals. |
Differentially expressed genes were identified using Sleuth (version 0.30.0). |
WBPaper00067263:rotr-1(ums53)_upregulated
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Transcripts that showed significantly decreased expression in pri-1(RNAi) animals comparing to in N2 animals fed with empty vector. |
Differential expression analysis was performed quasi-likelihood F-test with the generalized linear model (GLM) approach in edgeR ver 3.32.1. FDR < 0.05, fold change > 2. |
WBPaper00066418:pri-1(RNAi)_downregulated
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Starvation for 8 hours at mid-L4 larva stage. |
Transcripts that showed significantly decreased expression in zip-2(tm4248) animals starved for 8 hours on unseeded plate at mid-L4 larva stage. |
Differential expression analysis was performed using the quasi-likelihood F-test with the generalized linear model (GLM) approach in edgeR. Fold change > 2, FDR < 0.05. |
WBPaper00067829:starvation_dowmregulated_zip-2(tm4248)
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Transcripts that showed significantly decreased expression in skn-1(lax188);daf-2(e1370) comparing to in skn-1(lax188) animals |
DESeq2, fold change > 2, FDR < 0.05. |
WBPaper00067765:daf-2(e1370)_downregulated_skn-1(lax188)
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Transcripts that showed significantly increased expression in hsf-1(RNAi) comparing to in wild type animals injected with vector. |
Differential mRNA expression using DESeq2. mRNAs with a FDR < 0.05 and fold change > 2 considered differentially expressed. |
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
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Transcripts that showed significantly decreased expression in eat-2(ad1113) comparing to in N2. |
DESeq2. The genes with a fold change >= 2 and a false discovery rate (FDR) < 0.05 in a comparison were identified as significant DEGs. |
WBPaper00065746:eat-2(ad1113)_downregulated
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Transcripts that showed significantly decreased expression in scc-1(ubs19) comparing to in control animals. |
DESeq2 v.1.34, fold change > 2, FDR < 0.05. |
WBPaper00067078:scc-1(ubs19)_downregulated
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Transcripts that showed significantly decreased expression in vha-12(ok281) comparing to in N2 at L4 larva stage. |
Fold change > 2, FDR < 0.01 |
WBPaper00066743:vha-12(ok281)_downregulated
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Single-cell RNA-Seq cell group 20_1 expressed in neuron. |
scVI 0.6.0 |
WBPaper00065841:20_1
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Single-cell RNA-Seq cell group 80_0 expressed in neuron. |
scVI 0.6.0 |
WBPaper00065841:80_0
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Transcripts that showed significantly decreased expression in scc-1(ubs19);coh-1(ubs26) comparing to in control animals. |
DESeq2 v.1.34, fold change > 2, FDR < 0.05. |
WBPaper00067078:scc-1(ubs19);coh-1(ubs26)_downregulated
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Single-cell RNA-Seq cell group 128_0 expressed in neuron. |
scVI 0.6.0 |
WBPaper00065841:128_0
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Single-cell RNA-Seq cell group 20_0 expressed in neuron. |
scVI 0.6.0 |
WBPaper00065841:20_0
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