WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00281648 Gene Name  PPA43279
Sequence Name  ? PPA43279 Organism  Pristionchus pacificus
Automated Description  Predicted to enable ATP binding activity and proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven ATP synthesis and proton transmembrane transport. Predicted to be part of proton-transporting ATP synthase complex. Is an ortholog of C. elegans T26E3.7 and atp-1. In C. elegans, atp-1 is involved in iron import into cell. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:PPA43279.1 PPA43279.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA43279 PPA43279   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Bacteria infection: Serratia marcescens Pristionchus pacificus Genes with expression levels changed significantly after treatment of Serratia marcescens. Differential expression were calculated by empirical eBayes method using eBayes function. P_value <= 0.01 and log2 fold change > 1 were used to call differentially expressed genes in all datasets. WBPaper00041606:PP_S.marcescens_regulated

0 Expression Patterns

6 GO Annotation

Annotation Extension Qualifier
  involved_in
  involved_in
  enables
  enables
  involved_in
  part_of

0 Homologues

0 Locations

6 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  involved_in
  enables
  enables
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region