WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00227612 Gene Name  Bma-zfh-2
Sequence Name  ? Bm7351 Organism  Brugia malayi
Automated Description  Predicted to enable DNA binding activity and zinc ion binding activity. Is an ortholog of C. elegans zfh-2. Biotype  SO:0001217
Genetic Position  :±
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

16 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm7351f.1 Bm7351f.1   [unknown]
Transcript:Bm7351g.1 Bm7351g.1   [unknown]
Transcript:Bm7351h.1 Bm7351h.1   [unknown]
Transcript:Bm7351i.1 Bm7351i.1   [unknown]
Transcript:Bm7351b.1 Bm7351b.1   [unknown]
Transcript:Bm7351a.1 Bm7351a.1   [unknown]
Transcript:Bm7351c.1 Bm7351c.1   [unknown]
Transcript:Bm7351d.1 Bm7351d.1   [unknown]
Transcript:Bm7351e.1 Bm7351e.1   [unknown]
Transcript:Bm7351n.1 Bm7351n.1   [unknown]
Transcript:Bm7351o.1 Bm7351o.1   [unknown]
Transcript:Bm7351p.1 Bm7351p.1   [unknown]
Transcript:Bm7351j.1 Bm7351j.1   [unknown]
Transcript:Bm7351k.1 Bm7351k.1   [unknown]
Transcript:Bm7351l.1 Bm7351l.1   [unknown]
Transcript:Bm7351m.1 Bm7351m.1   [unknown]
 

Other

16 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm7351o Bm7351o   [unknown]
CDS:Bm7351p Bm7351p   [unknown]
CDS:Bm7351k Bm7351k   [unknown]
CDS:Bm7351l Bm7351l   [unknown]
CDS:Bm7351m Bm7351m   [unknown]
CDS:Bm7351n Bm7351n   [unknown]
CDS:Bm7351g Bm7351g   [unknown]
CDS:Bm7351h Bm7351h   [unknown]
CDS:Bm7351i Bm7351i   [unknown]
CDS:Bm7351j Bm7351j   [unknown]
CDS:Bm7351c Bm7351c   [unknown]
CDS:Bm7351d Bm7351d   [unknown]
CDS:Bm7351e Bm7351e   [unknown]
CDS:Bm7351f Bm7351f   [unknown]
CDS:Bm7351a Bm7351a   [unknown]
CDS:Bm7351b Bm7351b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

9 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly higher expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Upregulated
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly higher expression in L4 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Adult_Upregulated
  Transcripts that showed significantly decreased expression in female B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_F120_vs_F30
  Transcripts that showed significantly higher expression in L4 larva comparing to in microfilariae. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L4_vs_Micro_Upregulated
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_M30
  Transcripts that showed significantly decreased expression in male B. malayi 30 days after infecting gerbils, comparing to female B. malayi 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M30_vs_F30
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to 42 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_M42
  Transcripts that showed significantly decreased expression in female B. malayi 30 days after infecting gerbils, comparing to L4 female B. malayi animals. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_F30_vs_L4

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region