WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00226815 Gene Name  Bm6554
Sequence Name  ? Bm6554 Organism  Brugia malayi
Automated Description  Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of O. volvulus OVOC929. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm6554a.1 Bm6554a.1   [unknown]
Transcript:Bm6554b.1 Bm6554b.1   [unknown]
Transcript:Bm6554c.1 Bm6554c.1   [unknown]
Transcript:Bm6554d.1 Bm6554d.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm6554d Bm6554d   [unknown]
CDS:Bm6554c Bm6554c   [unknown]
CDS:Bm6554b Bm6554b   [unknown]
CDS:Bm6554a Bm6554a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly lower expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Downregulated
  Transcripts that showed significantly higher expression in adult comparing to in microfilariae. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:Adult_vs_Micro_Upregulated

0 Expression Patterns

8 GO Annotation

Annotation Extension Qualifier
  located_in
  located_in
  enables
  enables
  involved_in
  involved_in
  enables
  enables

0 Homologues

0 Locations

8 Ontology Annotations

Annotation Extension Qualifier
  located_in
  located_in
  enables
  enables
  involved_in
  involved_in
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region