WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00226305 Gene Name  Bma-lrk-1
Sequence Name  ? Bm6044 Organism  Brugia malayi
Automated Description  Predicted to enable ATP binding activity and protein kinase activity. Predicted to be involved in protein phosphorylation. Is an ortholog of C. elegans lrk-1. In C. elegans, lrk-1 is involved in several processes, including axon extension involved in axon guidance; negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway; and response to stress. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

6 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm6044b.1 Bm6044b.1   [unknown]
Transcript:Bm6044b.2 Bm6044b.2   [unknown]
Transcript:Bm6044b.3 Bm6044b.3   [unknown]
Transcript:Bm6044b.4 Bm6044b.4   [unknown]
Transcript:Bm6044a.1 Bm6044a.1   [unknown]
Transcript:Bm6044c.1 Bm6044c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm6044b Bm6044b   [unknown]
CDS:Bm6044a Bm6044a   [unknown]
CDS:Bm6044c Bm6044c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120
  Transcripts that showed significantly increased expression in male B. malayi 120 days after infecting gerbils, comparing to 30 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:upregulated_M120_vs_M30

0 Expression Patterns

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region