WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00225684 Gene Name  Bma-larp-1
Sequence Name  ? Bm5423 Organism  Brugia malayi
Automated Description  Predicted to enable RNA cap binding activity. Predicted to be involved in mRNA stabilization. Is an ortholog of C. elegans larp-1. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm5423b.1 Bm5423b.1   [unknown]
Transcript:Bm5423c.1 Bm5423c.1   [unknown]
Transcript:Bm5423d.1 Bm5423d.1   [unknown]
Transcript:Bm5423a.1 Bm5423a.1   [unknown]
Transcript:Bm5423e.1 Bm5423e.1   [unknown]
 

Other

5 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm5423a Bm5423a   [unknown]
CDS:Bm5423b Bm5423b   [unknown]
CDS:Bm5423c Bm5423c   [unknown]
CDS:Bm5423d Bm5423d   [unknown]
CDS:Bm5423e Bm5423e   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly higher expression in L3 larva comparing to in adult. edgeR v3.28. FDR < 0.05, fold change > 2. WBPaper00061765:L3_vs_Adult_Upregulated
  Proteins secreted by B.malayi at L3 larva stage, according to LC-MS-MS. N.A. WBPaper00050454:Secretome_protein

0 Expression Patterns

2 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region