WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00225158 Gene Name  Bma-lag-1
Sequence Name  ? Bm4897 Organism  Brugia malayi
Automated Description  Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is an ortholog of C. elegans lag-1. In C. elegans, lag-1 is involved in several processes, including cell differentiation; dauer exit; and regulation of DNA-templated transcription. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Brugia malayi 6279

0 Synonyms

Genomics

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Bm4897d.1 Bm4897d.1   [unknown]
Transcript:Bm4897c.2 Bm4897c.2   [unknown]
Transcript:Bm4897c.1 Bm4897c.1   [unknown]
Transcript:Bm4897b.1 Bm4897b.1   [unknown]
Transcript:Bm4897a.1 Bm4897a.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Bm4897a Bm4897a   [unknown]
CDS:Bm4897b Bm4897b   [unknown]
CDS:Bm4897c Bm4897c   [unknown]
CDS:Bm4897d Bm4897d   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in male B. malayi 120 days after infecting gerbils, comparing to female B. malayi 120 days after infecting gerbils. EdgeR(v3.16.5), FDR < 0.05. WBPaper00051007:downregulated_M120_vs_F120

0 Expression Patterns

7 GO Annotation

Annotation Extension Qualifier
  enables
  involved_in
  enables
  enables
  involved_in
  located_in
  enables

0 Homologues

0 Locations

7 Ontology Annotations

Annotation Extension Qualifier
  enables
  involved_in
  enables
  enables
  involved_in
  located_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region