WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00213081 Gene Name  Cjp-pash-1
Sequence Name  ? CJA37234 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable RNA binding activity; heme binding activity; and identical protein binding activity. Predicted to be involved in primary miRNA processing. Predicted to be part of microprocessor complex. Is an ortholog of C. elegans pash-1. In C. elegans, pash-1 is involved in primary miRNA processing and regulation of developmental process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA37234.1 CJA37234.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA37234 CJA37234   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-pash-1, AAAAACGTCACGACTTTCTGCAGCGAAAGACGCGCTTTCAAAGCTGGTACCGAAGCTGCG, WBGene00131416   Expr1087763 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-acs-16, AAATGGTAATTCATTTAAACACCTGTTTGCCACCAAATGACGACGCGCTGCGGTTACGTC, WBGene00183413   Expr1077389 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  part_of

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region