WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00184625 Gene Name  CJA29051
Sequence Name  ? CJA29051 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity and DNA binding activity. Predicted to be involved in chromatin remodeling. Is an ortholog of C. elegans let-418. In C. elegans, let-418 is involved in embryonic digestive tract morphogenesis; negative regulation of transcription by RNA polymerase II; and negative regulation of vulval development. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA29051b.1 CJA29051b.1   [unknown]
Transcript:CJA29051a.1 CJA29051a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA29051a CJA29051a   [unknown]
CDS:CJA29051b CJA29051b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA29051, AAACACGGACGATACATCATCAGAGGTGAAACCGGAAGAGGAGCAGGAGGAAAGAGACGC, WBGene00184625   Expr1087113 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-let-418, AAGGAAAAAGTATGAGCAAGACGGAGCTGGACGATGTGCTCCGCTGGGGAACTGAAGAGC, WBGene00138042   Expr1078610 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region