WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00182579 Gene Name  Cjp-hecd-1.7
Sequence Name  ? CJA27007 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ubiquitin-protein transferase activity. Is an ortholog of C. elegans hecd-1. In C. elegans, hecd-1 is involved in several processes, including hemidesmosome assembly; positive regulation of proteasomal ubiquitin-dependent protein catabolic process; and regulation of Notch signaling pathway. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA27007.1 CJA27007.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA27007 CJA27007   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA27007, GGCCGAAATTCTGCGCGAACGTCTTCTAACTGCGATCAACGAAAAGGGATTCCATTTGAA, WBGene00182579   Expr1082987 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  enables

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region