WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00182030 Gene Name  Cjp-tdc-1.1
Sequence Name  ? CJA26458 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable carboxy-lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in amino acid metabolic process and carboxylic acid metabolic process. Is an ortholog of C. elegans tdc-1. In C. elegans, tdc-1 is involved in octopamine biosynthetic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA26458b.1 CJA26458b.1   [unknown]
Transcript:CJA26458a.1 CJA26458a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA26458a CJA26458a   [unknown]
CDS:CJA26458b CJA26458b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-tdc-1, ACGATTCTGTGTGTGCGCTGAAAATGCGACGGACAAGGATATTGAAATTGCCTACGAAAT, WBGene00127676   Expr1081296 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables
  involved_in

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region