WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00180539 Gene Name  Cjp-hlh-6
Sequence Name  ? CJA24967 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable DNA-binding transcription factor activity and protein dimerization activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans hlh-6. In C. elegans, hlh-6 is involved in several processes, including nematode pharyngeal gland morphogenesis; positive regulation of multicellular organismal process; and regulation of DNA-templated transcription. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA24967b.1 CJA24967b.1   [unknown]
Transcript:CJA24967a.1 CJA24967a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA24967a CJA24967a   [unknown]
CDS:CJA24967b CJA24967b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-hlh-6, TACCAATATTTCCAGAGAAAAACGAATTTCCAAAGTGGACACCTTGCGACTGGCGATTCG, WBGene00180539   Expr1085491 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region