WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00179991 Gene Name  Cjp-rpb-2
Sequence Name  ? CJA24419 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable DNA binding activity; DNA-directed RNA polymerase activity; and ribonucleoside binding activity. Predicted to be involved in DNA-templated transcription. Is an ortholog of C. elegans rpb-2. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA24419b.1 CJA24419b.1   [unknown]
Transcript:CJA24419a.1 CJA24419a.1   [unknown]
Transcript:CJA24419d.1 CJA24419d.1   [unknown]
Transcript:CJA24419c.1 CJA24419c.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA24419d CJA24419d   [unknown]
CDS:CJA24419c CJA24419c   [unknown]
CDS:CJA24419b CJA24419b   [unknown]
CDS:CJA24419a CJA24419a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA24419, CCAAGACTTATGGTGCGATCCCTGCCGCCAAGAAAATCAAAGGGACAGACGGAAGCGTAA, WBGene00179991   Expr1072002 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-rpb-2, TGTGTCGGCCGTTGTTGATTGTCGAGGATCAGAAATTGGCGTTGAAAAAGAAGCATATTG, WBGene00130277   Expr1077894 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region