WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00176526 Gene Name  CJA20954
Sequence Name  ? CJA20954 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable actin binding activity; clathrin binding activity; and phospholipid binding activity. Predicted to be involved in endocytosis. Is an ortholog of C. elegans hipr-1. In C. elegans, hipr-1 is involved in several processes, including defecation; neurotransmitter secretion; and ultradian rhythm. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA20954.1 CJA20954.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA20954 CJA20954   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA28341, ATTTGGAGCGAGCAAAACTTGCTGCCCTCCGTAAACAACACTATCACATGGCTCAATTGG, WBGene00183915   Expr1074586 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-hipr-1, GAGCTTTTAAATTTGGTGGAAGAGGAGCCACAACAAGCCAGTCCATCCAGTCAGCCGGAT, WBGene00176526   Expr1079247 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA15471, CACTGGAAAAGGAAAGTTTGAGCATCTCATCGTTGCCGCGCAGGAAATTGCTGCATCGAC, WBGene00134675   Expr1082799 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  enables
  enables

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region