WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00137900 Gene Name  Cjp-msh-6.2
Sequence Name  ? CJA18696 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ATP binding activity and mismatched DNA binding activity. Predicted to be involved in mismatch repair. Is an ortholog of C. elegans msh-6. In C. elegans, msh-6 is involved in maintenance of DNA repeat elements and mismatch repair. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA18696b.1 CJA18696b.1   [unknown]
Transcript:CJA18696a.1 CJA18696a.1   [unknown]
Transcript:CJA18696c.1 CJA18696c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA18696b CJA18696b   [unknown]
CDS:CJA18696c CJA18696c   [unknown]
CDS:CJA18696a CJA18696a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA18696, CACATTATCACTCGATTTGCGACGCGTTCACCAATCATGCCAATGTTCGATTGGCGCATA, WBGene00137900   Expr1074245 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region