WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00136416 Gene Name  Cjp-pxn-1
Sequence Name  ? CJA17212 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable heme binding activity and peroxidase activity. Predicted to be involved in response to oxidative stress. Is an ortholog of C. elegans pxn-1. In C. elegans, pxn-1 is involved in muscle attachment and positive regulation of axon guidance. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA17212b.1 CJA17212b.1   [unknown]
Transcript:CJA17212c.1 CJA17212c.1   [unknown]
Transcript:CJA17212a.1 CJA17212a.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA17212a CJA17212a   [unknown]
CDS:CJA17212b CJA17212b   [unknown]
CDS:CJA17212c CJA17212c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-pxn-1, TTTTTAACAGAGTCACTTATAGGGAGCAGATGAATGCGGTAGGTTCTTTTTCTAAACCCC, WBGene00136416   Expr1076769 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA11379, AAAACGTCTTTATGTACCCGGGCAAAGAGAAGGAGAACTATGGAACGTGTGATATGATCG, WBGene00130583   Expr1083029 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region