WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00135937 Gene Name  Cjp-cul-3
Sequence Name  ? CJA16731 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Is an ortholog of C. elegans cul-3. In C. elegans, cul-3 is involved in cell development; protein catabolic process; and protein polyubiquitination. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA16731.1 CJA16731.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA16731 CJA16731   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA25736, CAATTCACGCAAAAGCTGGAAAGCATGTTCCGCGACAAGGAGCTGTGGCAGAATCTGGCG, WBGene00181308   Expr1088637 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA11069, ACCATCACCGACCATTATTAAACAGCGAATCGAAACACTGATTGAGCGGGAATATCTCGC, WBGene00130273   Expr1077563 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-cul-3, CAAGTTTATGCTCGAGCACAAGCGCATTGAGGATCTCACTCGTATTTTCCGCATTTTCAA, WBGene00135937   Expr1090046 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region