WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00135143 Gene Name  Cjp-ccep-290
Sequence Name  ? CJA15939 Organism  Caenorhabditis japonica
Automated Description  Predicted to be located in membrane. Is an ortholog of C. elegans ccep-290. In C. elegans, ccep-290 is involved in non-motile cilium assembly and protein localization to ciliary transition zone. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA15939a.1 CJA15939a.1   [unknown]
Transcript:CJA15939b.1 CJA15939b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA15939b CJA15939b   [unknown]
CDS:CJA15939a CJA15939a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

4 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA00841, ACGGCTGACCAGGGCCAACAAAGAGCTCATGATTACGTGTGAGCAGATCAAAAACGACGC, WBGene00120045   Expr1084179 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA21187, AAACAGAAAGGAAATCGTCCAGTTCATCGTCTTCTCGTATTTCGACACCGCCTAAATCCA, WBGene00176759   Expr1086016 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA01629, TCGGTGGAGGTGCTTAGTGGGGATAAGGAAAAGTTGGCAAGGACAATCGAAGAGCTACAG, WBGene00120833   Expr1088521 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA15939, AACTTGTGGAATGAGTACGCAATATACGGTGCACGGTGAGCAACAATGGAGGGATCAGAA, WBGene00135143   Expr1074567 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

1 GO Annotation

Annotation Extension Qualifier
  located_in

0 Homologues

0 Locations

1 Ontology Annotations

Annotation Extension Qualifier
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region