WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00135015 Gene Name  Cjp-hop-1
Sequence Name  ? CJA15811 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable aspartic endopeptidase activity, intramembrane cleaving. Predicted to be involved in protein processing. Predicted to be located in membrane. Is an ortholog of C. elegans hop-1. In C. elegans, hop-1 is involved in Notch signaling pathway and positive regulation of germ cell proliferation. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA15811b.1 CJA15811b.1   [unknown]
Transcript:CJA15811a.1 CJA15811a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA15811a CJA15811a   [unknown]
CDS:CJA15811b CJA15811b   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-hop-1, GGAAACCACGCGATCAAATAGCACACAGTTGACCCAATTTCCGAGTTCTGCGACTGAAAC, WBGene00135015   Expr1084347 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA27355, GATTTTCGTCGGCATCAATGTGAAACTCACGCAACCTGCCGAAACCACGTCCGCCAAAGT, WBGene00182927   Expr1079880 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region