WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00134530 Gene Name  Cjp-ncbp-2
Sequence Name  ? CJA15326 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable RNA cap binding activity. Predicted to be involved in mRNA cis splicing, via spliceosome. Predicted to be part of nuclear cap binding activity complex. Is an ortholog of C. elegans ncbp-2. In C. elegans, ncbp-2 is involved in primary miRNA processing. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA15326.1 CJA15326.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA15326 CJA15326   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-ncbp-2, AAAGAAGACCAAGTGTACGAACTGTTTGGAAGATCTGGAGACGTGCGAAGAGTCATCATG, WBGene00178026   Expr1086772 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA15326, TATGATCCGGAAAGAGGCGGTTACAATAGAGTTATCGCGCAGAAGAACGACCGAGGATAA, WBGene00134530   Expr1079477 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables
  part_of

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  enables
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region