WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00133303 Gene Name  Cjp-asm-2
Sequence Name  ? CJA14099 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable sphingomyelin phosphodiesterase activity. Predicted to be involved in sphingomyelin catabolic process. Is an ortholog of C. elegans asm-2. In C. elegans, asm-2 is involved in ceramide biosynthetic process and sphingomyelin catabolic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA14099.1 CJA14099.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA14099 CJA14099   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

3 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-asm-2, TTTTTGTGTGATATCAAGAAGGGTAGAAGTTACGATGAGAGTTTCTGTGATCATTTGACT, WBGene00133303   Expr1089812 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA23461, TGCATGCACATTTCTAGTTGACGGTGTACAAGCTTTGATTGCTCAAAACTCTACGGACAA, WBGene00179033   Expr1078348 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA28066, CGAAAGGAACTGATTATGCTCCCGCGCCACCCAAGTACAAGGTAATCTGCGGAAAAACCC, WBGene00183640   Expr1079918 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region