WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00132578 Gene Name  Cjp-pyr-1
Sequence Name  ? CJA13374 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable several functions, including ATP binding activity; amino acid binding activity; and aspartate carbamoyltransferase activity. Predicted to be involved in 'de novo' pyrimidine nucleobase biosynthetic process and amino acid metabolic process. Is an ortholog of C. elegans pyr-1. In C. elegans, pyr-1 is involved in several processes, including nematode pharyngeal gland morphogenesis; nematode pharynx development; and pyrimidine nucleobase biosynthetic process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA13374.1 CJA13374.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA13374 CJA13374   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA27514, GTAATGGAATGTTCATTCGAATGTCGATTCTTTCACTTCTTCTTGGAAGAGGAAATCTCT, WBGene00183086   Expr1070525 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-pyr-1, TCGGAGGATATCACGCGAAGGCTGAAATGCTCAAGTCTGTGGAAGTTCTTCAAAAGCTTG, WBGene00132578   Expr1091227 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

8 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  enables
  involved_in
  enables

0 Homologues

0 Locations

8 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  enables
  enables
  involved_in
  enables
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region