WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00131713 Gene Name  Cjp-efl-1
Sequence Name  ? CJA12509 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and protein dimerization activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of transcription regulator complex. Is an ortholog of C. elegans efl-1. In C. elegans, efl-1 is involved in several processes, including negative regulation of Ras protein signal transduction; negative regulation of vulval development; and regulation of gene expression. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA12509a.1 CJA12509a.1   [unknown]
Transcript:CJA12509b.1 CJA12509b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA12509b CJA12509b   [unknown]
CDS:CJA12509a CJA12509a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-efl-1, AACCACGAACTGCACGATTTTGTGCGCAAGGAACGACAATTTATGGGCGGAGAAGAGCAT, WBGene00131713   Expr1077240 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

5 GO Annotation

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  part_of

0 Homologues

0 Locations

5 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables
  involved_in
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region