WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00131184 Gene Name  CJA11980
Sequence Name  ? CJA11980 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable translation initiation factor activity. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex. Is an ortholog of C. elegans R08D7.4. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA11980a.1 CJA11980a.1   [unknown]
Transcript:CJA11980a.2 CJA11980a.2   [unknown]
Transcript:CJA11980b.1 CJA11980b.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA11980b CJA11980b   [unknown]
CDS:CJA11980a CJA11980a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-eif-3.D, GAAACAAAAGCCAGGAAAGTATTTGCTGATGAAGGACCCGCAATCGCCGGTGGTTCGCCT, WBGene00124738   Expr1085494 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA11980, CCGGAAAATCAGGGAAAAGTACGGTACTTGGACTGGTGCAATTTTGAAGACAGCGATTGG, WBGene00131184   Expr1087986 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

3 GO Annotation

Annotation Extension Qualifier
  enables
  part_of
  located_in

0 Homologues

0 Locations

3 Ontology Annotations

Annotation Extension Qualifier
  enables
  part_of
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region