WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00131044 Gene Name  Cjp-chc-1
Sequence Name  ? CJA11840 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable clathrin light chain binding activity and structural molecule activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of clathrin coat of coated pit; clathrin coat of trans-Golgi network vesicle; and clathrin complex. Is an ortholog of C. elegans chc-1. In C. elegans, chc-1 is involved in several processes, including apical protein localization; determination of adult lifespan; and positive regulation of clathrin-dependent endocytosis. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA11840.1 CJA11840.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA11840 CJA11840   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-chc-1, CAAAAAGGACAAACTGTACAAGGATGCGATGGAGTACGCGGCCGAGTCGCGAAACGGCGA, WBGene00131044   Expr1088537 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

7 GO Annotation

Annotation Extension Qualifier
  part_of
  part_of
  part_of
  enables
  enables
  involved_in
  involved_in

0 Homologues

0 Locations

7 Ontology Annotations

Annotation Extension Qualifier
  part_of
  part_of
  part_of
  enables
  enables
  involved_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region