WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00130933 Gene Name  Cjp-let-526
Sequence Name  ? CJA11729 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable DNA binding activity. Predicted to be involved in chromatin remodeling. Predicted to be part of SWI/SNF complex and brahma complex. Is an ortholog of C. elegans let-526. In C. elegans, let-526 is involved in gonad development; nematode larval development; and positive regulation of transcription by RNA polymerase II. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA11729b.1 CJA11729b.1   [unknown]
Transcript:CJA11729a.1 CJA11729a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA11729b CJA11729b   [unknown]
CDS:CJA11729a CJA11729a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA10306, GGCTATCAACTCAGAAAACACTATCAGCGACACTTGCTGCTTTTGGAGTGCCGTGAAACT, WBGene00129510   Expr1076707 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

4 GO Annotation

Annotation Extension Qualifier
  enables
  part_of
  involved_in
  part_of

0 Homologues

0 Locations

4 Ontology Annotations

Annotation Extension Qualifier
  enables
  part_of
  involved_in
  part_of

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region