WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00130571 Gene Name  Cjp-itr-1
Sequence Name  ? CJA11367 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable inositol 1,4,5 trisphosphate binding activity and inositol 1,4,5-trisphosphate-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in endoplasmic reticulum and membrane. Is an ortholog of C. elegans itr-1. In C. elegans, itr-1 is involved in several processes, including determination of adult lifespan; mating behavior; and system process. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA11367b.1 CJA11367b.1   [unknown]
Transcript:CJA11367a.1 CJA11367a.1   [unknown]
 

Other

2 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA11367b CJA11367b   [unknown]
CDS:CJA11367a CJA11367a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-itr-1, ACTGGTCCTGAAAGTTATGTGGCACAATGTGTTAAAGAAAGGAATTTGGATTGGTTCCCC, WBGene00130571   Expr1085273 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA24695, AAATCCAGGTTTGTGTGGTTCGATGATTTGTTTGCAGTGATCAGATACATACATATCAGT, WBGene00180267   Expr1088983 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

10 GO Annotation

Annotation Extension Qualifier
  located_in
  enables
  enables
  enables
  involved_in
  enables
  involved_in
  involved_in
  located_in
  involved_in

0 Homologues

0 Locations

10 Ontology Annotations

Annotation Extension Qualifier
  located_in
  enables
  enables
  enables
  involved_in
  enables
  involved_in
  involved_in
  located_in
  involved_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region