WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00129629 Gene Name  Cjp-sre-4
Sequence Name  ? CJA10425 Organism  Caenorhabditis japonica
Automated Description  Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is an ortholog of C. elegans sre-4. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

4 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA10425a.1 CJA10425a.1   [unknown]
Transcript:CJA10425d.1 CJA10425d.1   [unknown]
Transcript:CJA10425b.1 CJA10425b.1   [unknown]
Transcript:CJA10425c.1 CJA10425c.1   [unknown]
 

Other

4 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA10425a CJA10425a   [unknown]
CDS:CJA10425d CJA10425d   [unknown]
CDS:CJA10425b CJA10425b   [unknown]
CDS:CJA10425c CJA10425c   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-sre-4, CAGCTCTTCAAACGCGGCATCATCTCATGCATAGTGTTCTCGGTGATTTGCGGTGTTTTT, WBGene00129629   Expr1086034 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
CJA20666, GATCAACGACGACGAGGGAAGTGTGAACAAGCCGAGAACGTGTCGAAAAATGGAAGACGT, WBGene00176238   Expr1074382 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  located_in

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  located_in

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region