WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00129265 Gene Name  Cjp-odc-1
Sequence Name  ? CJA10061 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable catalytic activity. Predicted to be involved in polyamine biosynthetic process. Is an ortholog of C. elegans odc-1. In C. elegans, odc-1 is involved in putrescine biosynthetic process from arginine, via ornithine. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA10061a.1 CJA10061a.1   [unknown]
Transcript:CJA10061b.1 CJA10061b.1   [unknown]
Transcript:CJA10061c.1 CJA10061c.1   [unknown]
 

Other

3 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA10061b CJA10061b   [unknown]
CDS:CJA10061c CJA10061c   [unknown]
CDS:CJA10061a CJA10061a   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

1 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Cjp-odc-1, ACTTGGTGGAAGACAAGAAGCTTCTTCCAAAAATGGCGGTTGGCGATTGGCTCTATTATC, WBGene00129265   Expr1090091 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  involved_in
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  involved_in
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region