WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00129202 Gene Name  Cjp-fox-1
Sequence Name  ? CJA09998 Organism  Caenorhabditis japonica
Automated Description  Predicted to enable RNA binding activity. Is an ortholog of C. elegans fox-1. In C. elegans, fox-1 is involved in several processes, including mRNA alternative trans-splicing; primary sex determination; and regulation of gene expression. Biotype  SO:0001217
Genetic Position  :±
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

0 Synonyms

Genomics

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:CJA09998.2 CJA09998.2   [unknown]
Transcript:CJA09998.1 CJA09998.1   [unknown]
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA09998 CJA09998   [unknown]

0 RNAi Result

0 Allele

0 Chromosome

0 Chromosome Location

2 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  

0 Downstream Intergenic Region

0 Expression Clusters

2 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
CJA18684, GAGGATCAATCCAGATGTTTGTCACACTTCTTCCCAGTACTGTGTAAGAGCTACTTATTC, WBGene00137888   Expr1075408 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  
Cjp-fox-1, GTACTTCATGTACCATCAGGCCAAACAACAAGAATTACCAGGACGGATTCCATCATCTGG, WBGene00129202   Expr1075617 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

2 GO Annotation

Annotation Extension Qualifier
  enables
  enables

0 Homologues

0 Locations

2 Ontology Annotations

Annotation Extension Qualifier
  enables
  enables

0 Regulates Expr Cluster

0 Sequence

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region